robert z selden jr, blackwater draw, clovis, agate basin, 3d, 3d scan, 3d model, projectile point, dart point, new mexico, culture, history, prehistory, heritage

3D Scan Data for Selected Artifacts from Blackwater Draw National Historic Landmark

Between February 8-11, 2016, selected artifacts from the Blackwater Draw National Historic Landmark (LA3324) were scanned in advance of a grant proposal to digitally aggregate the Clovis-era artifacts from the Clovis type site. These data were collected using a NextEngineHD running ScanStudioHD Pro, and post-processed in Geomagic Design X 2016.0.1. All data associated with this project are publicly available (open access) and accessible in Zenodo under a Creative Commons Attribution license, where they can be downloaded for use in additional projects and learning activities. These data have the capacity to augment a variety of research designs spanning the digital humanities, applications of geometric morphometrics, and many others. Additionally, these scans will augment a wide range of comparative research topics throughout the Americas and beyond. Reuse potential for these data is significant.

Unprocessed 3D data are included on the landing page, and links to the processed files are included in the data paper. Download the data paper here:: 3D Scan Data for Selected Artifacts from Blackwater Draw National Historic Landmark

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robert z selden jr, gault, clovis, texas, 3d, 3d scan, 3d model, projectile point, dart point, texas, culture, history, prehistory, heritage

Preprint available on SocArXiv

Now available on SocArXiv – download here. Click on the image of the first page below for the option to download a preprint of the data paper, and access links to the open access 3D scan data. The paper does include a 3D figure–preprint must be downloaded then opened in your PDF viewer to activate the 3D model. Learn more about how to interact with a 3D PDF here. Many thanks to the folks at the Open Science Framework, SocArXiv and Overleaf. This data paper is currently in review.

DOI 10.17605/OSF.IO/7D4K5 | ARK c7605/osf.io/7d4k5

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New publications in the Journal of Texas Archeology and History

The first two peer-reviewed data papers have just been published in the Journal of Texas Archeology and History, detailing the hardware, software and methods used to generate these two important datasets. This helps to keep the data collection process transparent, and ensures that we are following best practices in terms of data collection, processing and digital curation. These data papers are open access; simply click on the image of the cover page to be transferred to each.

Many thanks to the Caddo Nation of Oklahoma, Texas Archeological Research Laboratory and the Texas Parks and Wildlife Department for the requisite permissions and access needed to generate the scans.

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Geometric Morphometrics and a 3D Caddo Vessel from the Sam Kaufman Site at SMU

While yes, this post contains a great interactive figure of an incredible Caddo vessel from the Sam Kaufman site (curated at Southern Methodist University #SMU), I wanted to take a moment to bring us full-circle, and return to the reason that I am scanning all of these vessels. Some time ago, I began getting fascinated by the high degree of variability in Caddo vessel shape and size, and have since also noticed some degree of variation in asymmetry.

At the same time that my interest in this topic began to increase, I also quickly realized just how much room for growth that there was in terms of applying geometric morphometrics to archaeological problems. It took time to get through the literature; and I kept finding new articles and book chapters listed in the references of my readings that had escaped the reach of my initial literature review.

Since I had been tinkering with social networking, I reached out to a colleague to assist me in building a citation network. That network has since been completed, and proved to be an invaluable asset in terms of not only centralizing the archaeological literature associated with geometric morphometrics, but it helped me to identify those works in the geometric morphometric literature that are most often cited (InDegree) and most important (identified using Google’s PageRank algorithm) to the overall network (click here to view the interactive network).

GMNET
Directed bipartite citation network for studies of geometric morphometrics in archaeology.

Having made my way through the literature, I began to think through the various methods of landmark and semilandmark applications that were available (based on the numerous research questions that could be asked of these data), and quickly found that the configurations were really only limited by my 3D modeling abilities. At that point, I ventured up to Lakewood, Colorado to spend some time working with the crew at Geomagic, where I learned how to use and employ the various features of Geomagic Design X and Control X (more here). Using these tools, I was able to devise a method of applying landmarks in a replicable manner using reference geometry that was built around the 3D mesh of the ceramic vessel. This first iteration of the landmark and semilandmark configuration worked very well for addressing some of my initial questions (see that in the video below).

From here, things began to get more complex. In October of last year, I headed to Portugal for what would be an important transitional period for my work; learning how to write scripts for, and run the various analyses in, the geomorph package in R. This opened something of a Pandora’s box for me, from which it is very likely that I will never fully recover. Needless to say, shape, form, allometry and asymmetry shifted quickly from a peripheral interest to something of a primary project.

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Procrustes superimposition of landmarks and sliding adaptive semilandmarks used in the analysis of Caddo ceramics.

Since then, there have been dozens of iterations and developments in my landmark and semi-landmark configurations and analyses; many of which (particularly those associated with my morphological integration inquiries) are actively evolving. I was fortunate to receive funding for much of this work through the National Center for Preservation Technology and Training (NCPTT); a group that I have really enjoyed collaborating with.

As you interact with this vessel from the Sam Kaufman site, consider where (and how) you would apply landmarks/semi-landmarks to the 3D surface.

In terms of theory, analyses of geometric morphometrics can be couched within several interesting anthropological lines of inquiry that include, but are not limited to, (1) identifying the locus of a specific innovation, (2) the spatial and temporal dynamics of morphological variation for specific elements (neck, body, base, etc.) of ceramic design, (3) identifying or refining social networks used by specific Caddo polities/groups during temporal periods previously defined—primarily—through design-based seriations, (4) intra/inter-polity/group variation of shape, form, allometry and asymmetry for ceramic design, (5) potential trade relationships based upon the presence of a specific shape/form of vessel outside of known (assumed) social boundaries, and (6) the power or influence that shifted among and between polities through time. These considerations could be woven into discussions of communities of practice, craft specialization, ceramic technological organization, politics, religion, and—possibly—inter/intra-polity disputes and warfare. Furthermore, this research design has the capacity to inform greatly upon the evolution of ceramic design as it relates to the shape, form, allometry and asymmetry that occurs in Caddo vessels, and by adding the related qualitative measures to our results we might just have the potential to bolster evidence for human behaviors associated with ceramic production and use within the larger ancestral Caddo territory.

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Historic era (1680+) Caddo networks based upon ceramic types (as I tip my hat to Dr. Timothy K. Perttula). Incorporating elements of vessel shape, form, allometry and asymmetry may help us to further refine this current iteration of the Historic Caddo network.

Initially a development in the biological sciences, the study of geometric morphometrics in archaeology will no doubt include some interesting discussions regarding the various analytical and theoretical components that are most appropriate for a cultural system versus a biological system as we continue to press forward. There remains plenty of thinking left to do on this subject, but based upon the preliminary results, the capacity for geometric morphometrics to inform upon issues related to material culture and cultural systems could be enormous.

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The very humble beginnings of exploring directional and fluctuating asymmetry in Caddo vessels.

Beyond the realm of empirical geometric morphometric studies, lies the domain of theoretical morphospace. Biologists have gainfully used theoretical morphospace to aid in clarifying issues of morphological change through time. They have done so by aggregating the results of geometric morphometric studies–a dialogue which would seemingly fit very well within the scope of anthropological and archaeological inquiry. By definition, theoretical morphospace represents the full range of possible morphologies for a group of artifacts; allowing investigators to posit, and contemplate, more- and less-adaptive morphologies (similarities and differences). It is within discussions of theoretical morphological transitions where I see the greatest promise for geometric morphometrics in archaeology; an ambit of inquiry in which the skeleton trees and topological properties of the artifacts tell us a much more dynamic story with regard to the progression of a particular shape (bottle, bowl, olla, etc.) through time. Within the context of my own long-term research design, theoretical morphospace seemingly holds much promise, and may represent the approach needed to identify, unlock and unpack a ceramic morphological transition that remains hidden in the various vessel shapes once employed by Caddo potters.

So, while the 3D images are fun to interact with–and have any number of preservation, access and outreach perks–my intention is to use them to bolster our discussions of shape, form, allometry and asymmetry in Caddo ceramic studies, and to use that evidence to posit a number of novel insights into the highly variable and dynamic prehistoric landscape that the Caddo people once commanded.

Many thanks to the Caddo Nation of Oklahoma and Southern Methodist University (Dr. Sunday Eiselt in particular) for the requisite permissions and access needed to scan this important artifact from the ancestral Caddo territory, and to present the 3D model here in color.

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robert z selden jr, archaeology, archeology, geometric morphometric, ceramic, analysis, mathematics, statistics, 3d, 3d scan

On Missing Data: 3D Morphometrics of Ceramic Artifacts

In the sample of complete and reconstructed Caddo NAGPRA vessels from the Turner Collection, many were found to include missing data (most often from sherds that were never recovered). While we have not been scanning vessels with large amounts of missing data–must be very close to complete–we needed to test the various methods by which those missing data can be reconstructed. Further, we wanted to explore the deviation of the results from the original mesh.

To do this, we used a whole/intact vessel from the Ellis Collection, cut a hole in the mesh, then used one of three functions in Geomagic Design X (defeature, fill holes, and edit boundaries) to generate new data over that area. Shifting over to Geomagic Verify, we use the original mesh as the nominal data, and the scan with missing data as the scan data to calculate the deviation between the two.

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Results from the edit boundaries function.

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Results from the fill holes function.

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Results from the defeature function.

In this case, the defeature function resulted in the lowest deviation from the original surface; however, this is not always the case. Each of the three functions was found to be successful in addressing missing data, and all warrant exploration on areas of the vessel that are geometrically similar to that where the missing data occurs to identify which function works best in each individual case. Additionally, the results of these comparisons should augment any publication as supplementary data.

My work with geometric morphometrics employs landmarks and sliding adaptive semilandmarks along a spline to compare various aspects of vessel shape, and selecting the correct function to address missing data in a sample could potentially impact those results. Through making an informed decision regarding which function to implement, we are mitigating a–potentially–higher degree of error within our sample.

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